Data Grids

Tabular lists of entities, displayed in data grids, comprise a major part of the CIViC user interface. This section details the various data grids that users will encounter while using CIViC.

Evidence Grid

Screenshot of the CIViC Evidence grid
Evidence grid

The evidence grid displays lists of evidence items, and provides various methods to filter subsets of evidence items of interest to the user.

Column

Description

EID

Evidence ID

Molecular Profile

Molecular Profile associated with the Evidence

Disease

Disease associated with the Evidence

Therapies

Therapies (e.g. drugs) associated with the Evidence

IT

Therapy Interaction Type

DESC

Evidence description

EL

Evidence Level

ET

Evidence type

ED

Evidence direction

S

Significance

VO

Variant origin

R

Evidence Rating

Assertion Grid

Screenshot of the CIViC Assertion grid
Assertion grid

Assertion grids display lists of assertion items, and provide various methods to filter subsets of assertions of interest to the user.

Column

Description

AID

Assertion ID

Molecular Profile

Molecular Profile associated with the Assertion

Disease

Disease

Therapies

Therapies associated with the item

IT

Therapy Interaction Type

SUM

Assertion summary

AT

Assertion type

AD

Assertion direction

S

Significance

CAT

AMP/ASCO/CAT Category

Evidence Count

Count of evidence items associated with Assertion

Activity Feed

Screenshot of the CIViC Activity feed
Activity feed

The Activity Feed (Curation Event Timeline) displays recent curation activity. Each event includes the responsible curator/editor, action (comment, addition, revision, etc), affected entities (gene, molecular profile, evidence, etc), organization, and timestamp. The displayed events can be optionally configured to show Child Events and filtered to specific actions types, curators, or organizations.

Other Data Grids

CIViC also provides data grids for Genes, Molecular Profiles, Variants, Variant Groups, Clinical Trials, Diseases, Therapies, Phenotypes, Variant Types, and Sources. These grids are relatively self-explanatory.